Package: tbeploads 0.0.0.9000

tbeploads: Calculate Loading Data to Tampa Bay

Loading data from major sources to Tampa Bay are calculated on a monthly or annual basis. Major sources include domestic point source (reuse, end of pipe), industrial point source, material losses, non-point sources (MS4), atmospheric deposition, and groundwater.

Authors:Marcus Beck [aut, cre], Ed Sherwood [aut], Ray Pribble [aut]

tbeploads_0.0.0.9000.tar.gz
tbeploads_0.0.0.9000.zip(r-4.7)tbeploads_0.0.0.9000.zip(r-4.6)tbeploads_0.0.0.9000.zip(r-4.5)
tbeploads_0.0.0.9000.tgz(r-4.6-any)tbeploads_0.0.0.9000.tgz(r-4.5-any)
tbeploads_0.0.0.9000.tar.gz(r-4.7-any)tbeploads_0.0.0.9000.tar.gz(r-4.6-any)
tbeploads_0.0.0.9000.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
tbeploads/json (API)
NEWS

# Install 'tbeploads' in R:
install.packages('tbeploads', repos = c('https://fawda123.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/tbep-tech/tbeploads/issues

Datasets:
  • aa_corrections - Allocation assessment TN load corrections by bay segment and entity
  • ad_distance - Data frame of distances of segment locations to National Weather Service (NWS) sites
  • allflo - Data frame of all flow data used in 'anlz_nps_gaged' and 'anlz_nps_ungaged'
  • allwq - Data frame of all water quality data used in 'anlz_nps_gaged'
  • clucsid - Lookup table for FLUCCSCODE conversion to CLUCSID and IMPROVED
  • conserv_correction - Conservation land correction fractions for NPS/MS4 allocation assessment
  • contdry - Upper Floridan Aquifer potentiometric surface raster, dry season 2022
  • contwet - Upper Floridan Aquifer potentiometric surface raster, wet season 2022
  • dbasing - Basin information for coastal subbasin codes
  • dps_allocations - TBNMC TN load allocations for DPS domestic wastewater facilities
  • emc - Event Mean Concentration (EMC) data for CLUCSID in Tampa Bay
  • facilities - Domestic and industrial point source facilities, including industrial with material losses
  • hydro_baseline - Historic 1992-1994 mean total water load baseline by bay segment and basin
  • ml_allocations - TBNMC TN load allocations for industrial material loss (ML) facilities
  • nps_allocations - TBNMC TN load allocations for NPS/MS4 entities
  • nps_distance - Data frame of distances of drainage basin locations to National Weather Service (NWS) sites
  • ps_allocations - TBNMC TN load allocations for IPS point source facilities
  • rain - Data frame of daily rainfall data from NOAA NCDC National Weather Service (NWS) sites from 2017 to 2023
  • rain_historic - Data frame of historical daily rainfall datas
  • rcclucsid - Lookup table for CLUCSID runoff coefficients
  • tbbase - Combined spatial data required for non-point source (NPS) ungaged estimate
  • tbdbasin - Simple feature polygons major drainage basins in the Tampa Bay Estuary Program boundary
  • tbfullshed - Simple features polygon for the Tampa Bay Estuary Program boundary
  • tbjuris - Simple feature polygons of jurisdictional boundaries in the Tampa Bay Estuary Program boundary
  • tblu2023 - Simple feature polygons of 2023 land use in the Tampa Bay Estuary Program boundary
  • tbsegdetail - Simple feature polygons of Tampa Bay segments with shoreline detail
  • tbsoil - Simple feature polygons of soil data in the Tampa Bay Estuary Program boundary
  • tbsubshed - Simple feature polygons of sub-watersheds in the Tampa Bay Estuary Program boundary
  • usgsflow - Data frame of USGS stream flow data from the USGS NWIS database for 2021 to 2023

On CRAN:

Conda:

data-analysisloadstampa-baytbeptbnmcwater-quality

5.05 score 12 scripts 50 exports 122 dependencies

Last updated from:a3dfc60220. Checks:7 NOTE, 2 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-x86_64NOTE453
source / vignettesOK520
linux-release-x86_64NOTE433
macos-release-arm64NOTE296
macos-oldrel-arm64NOTE335
windows-develNOTE435
windows-releaseNOTE391
windows-oldrelNOTE378
wasm-releaseOK246

Exports:anlz_aaanlz_adanlz_dpsanlz_dps_facilityanlz_gwanlz_ipsanlz_ips_facilityanlz_mlanlz_ml_facilityanlz_npsanlz_nps_gagedanlz_nps_psremoveanlz_nps_ungagedanlz_sprutil_aa_npsfactorsutil_getrainutil_gw_getcontourutil_gw_getwqutil_gw_gradutil_gw_showgradutil_nps_fillmiswqutil_nps_getextflowutil_nps_getflowutil_nps_getswfwmdutil_nps_getusgsflowutil_nps_getwqutil_nps_landsoilutil_nps_landsoilrcutil_nps_lusummutil_nps_preplogutil_nps_preprainutil_nps_segmentutil_nps_tbbaseutil_nps_unionutil_nps_unionchunkutil_nps_unionnochunkutil_prepvernautil_ps_addcolutil_ps_checkflsutil_ps_checkuniutil_ps_facinfoutil_ps_fillmisutil_ps_fixoutfallutil_ps_getaocutil_ps_getmacdillutil_ps_miscutil_ps_mosaicutil_ps_pascoreuseutil_spr_getwqutil_summ

Dependencies:askpassbase64encbitbit64bslibcachemcellrangerclassclassIntclicliprcpp11crayoncrosstalkcurldata.tabledataRetrievalDBIdigestdplyre1071evaluatefarverfastmapflextablefontawesomefontBitstreamVerafontLiberationfontquiverfsgdtoolsgenericsggplot2gluegtablehighrhmshtmltoolshtmlwidgetshttrhttr2isobandjquerylibjsonliteKernSmoothknitrlabelinglaterlatticelazyevalleafletleaflet.providerslifecyclelubridatemagrittrMASSmemoisemimeofficeropensslopenxlsxotelpatchworkpdftoolspillarpkgconfigplotlypngprettyunitsprogresspromisesproxypurrrqpdfR6raggrappdirsrasterRColorBrewerRcppreactablereactRreadrreadxlrematchrlangrmarkdownrvests2S7sassscalesselectrsfspstringistringrsyssystemfontstbeptoolsterratextshapingtibbletidyrtidyselecttimechangetinytextzdbunitsutf8uuidvctrsviridisLitevroomwhiskerwithrwkxfunxml2yamlzipzoo

Allocation Assessment

Rendered fromaa.Rmdusingknitr::rmarkdownon Jun 03 2026.

Last update: 2026-05-15
Started: 2026-05-15

Atmospheric Deposition (AD)

Rendered fromad.Rmdusingknitr::rmarkdownon Jun 03 2026.

Last update: 2026-04-27
Started: 2026-04-27

Domestic Point Source (DPS)

Rendered fromdps.Rmdusingknitr::rmarkdownon Jun 03 2026.

Last update: 2026-04-27
Started: 2026-04-27

Getting started

Rendered fromtbeploads.Rmdusingknitr::rmarkdownon Jun 03 2026.

Last update: 2026-04-27
Started: 2024-01-16

Groundwater (GW)

Rendered fromgw.Rmdusingknitr::rmarkdownon Jun 03 2026.

Last update: 2026-04-29
Started: 2026-04-27

Industrial Point Source (IPS)

Rendered fromips.Rmdusingknitr::rmarkdownon Jun 03 2026.

Last update: 2026-04-27
Started: 2026-04-27

Material Losses (ML)

Rendered fromml.Rmdusingknitr::rmarkdownon Jun 03 2026.

Last update: 2026-04-27
Started: 2026-04-27

Non-Point Source (NPS)

Rendered fromnps.Rmdusingknitr::rmarkdownon Jun 03 2026.

Last update: 2026-04-27
Started: 2026-04-27

Springs (SPR)

Rendered fromspr.Rmdusingknitr::rmarkdownon Jun 03 2026.

Last update: 2026-04-30
Started: 2026-04-27

Readme and manuals

Help Manual

Help pageTopics
Allocation assessment TN load corrections by bay segment and entityaa_corrections
Data frame of distances of segment locations to National Weather Service (NWS) sitesad_distance
Data frame of all flow data used in 'anlz_nps_gaged' and 'anlz_nps_ungaged'allflo
Data frame of all water quality data used in 'anlz_nps_gaged'allwq
Allocation assessment for DPS, IPS, and NPS/MS4 entitiesanlz_aa
Calculate AD loads and summarizeanlz_ad
Calculate DPS reuse and end of pipe loads and summarizeanlz_dps
Calculate DPS reuse and end of pipe loads from raw facility dataanlz_dps_facility
Calculate groundwater loads to Tampa Bay segmentsanlz_gw
Calculate IPS loads and summarizeanlz_ips
Calculate IPS loads from raw facility dataanlz_ips_facility
Calculate material loss (ML) loads and summarizeanlz_ml
Calculate material loss (ML) loads from raw facility dataanlz_ml_facility
Calculate non-point source (NPS) loads for Tampa Bayanlz_nps
Calculate non-point source (NPS) loads for gaged basinsanlz_nps_gaged
Remove point source loads from non-point source load estimatesanlz_nps_psremove
Estimated non-point source (NPS) ungaged loadsanlz_nps_ungaged
Calculate spring loads to Hillsborough Bayanlz_spr
Lookup table for FLUCCSCODE conversion to CLUCSID and IMPROVEDclucsid
Conservation land correction fractions for NPS/MS4 allocation assessmentconserv_correction
Upper Floridan Aquifer potentiometric surface raster, dry season 2022contdry
Upper Floridan Aquifer potentiometric surface raster, wet season 2022contwet
Basin information for coastal subbasin codesdbasing
TBNMC TN load allocations for DPS domestic wastewater facilitiesdps_allocations
Event Mean Concentration (EMC) data for CLUCSID in Tampa Bayemc
Domestic and industrial point source facilities, including industrial with material lossesfacilities
Historic 1992-1994 mean total water load baseline by bay segment and basinhydro_baseline
TBNMC TN load allocations for industrial material loss (ML) facilitiesml_allocations
TBNMC TN load allocations for NPS/MS4 entitiesnps_allocations
Data frame of distances of drainage basin locations to National Weather Service (NWS) sitesnps_distance
TBNMC TN load allocations for IPS point source facilitiesps_allocations
Data frame of daily rainfall data from NOAA NCDC National Weather Service (NWS) sites from 2017 to 2023rain
Data frame of historical daily rainfall datasrain_historic
Lookup table for CLUCSID runoff coefficientsrcclucsid
Combined spatial data required for non-point source (NPS) ungaged estimatetbbase
Simple feature polygons major drainage basins in the Tampa Bay Estuary Program boundarytbdbasin
Simple features polygon for the Tampa Bay Estuary Program boundarytbfullshed
Simple feature polygons of jurisdictional boundaries in the Tampa Bay Estuary Program boundarytbjuris
Simple feature polygons of 2023 land use in the Tampa Bay Estuary Program boundarytblu2023
Simple feature polygons of Tampa Bay segments with shoreline detailtbsegdetail
Simple feature polygons of soil data in the Tampa Bay Estuary Program boundarytbsoil
Simple feature polygons of sub-watersheds in the Tampa Bay Estuary Program boundarytbsubshed
Data frame of USGS stream flow data from the USGS NWIS database for 2021 to 2023usgsflow
Create NPS disaggregation factors for allocation assessmentutil_aa_npsfactors
Get rainfall data at NOAA NCDC sites for atmospheric deposition and non-point source ungaged calculationsutil_getrain
Download and rasterize FDEP Upper Floridan Aquifer potentiometric surfaceutil_gw_getcontour
Get groundwater quality concentrations for Floridan aquifer segmentsutil_gw_getwq
Compute hydraulic gradient per bay segment from potentiometric surface rasterutil_gw_grad
Visualise the hydraulic gradient for a bay segmentutil_gw_showgrad
Fill in missing water quality values for non-point source (NPS) datautil_nps_fillmiswq
Get external flow data not from USGS for NPS calculationsutil_nps_getextflow
Get flow data from for NPS calculations at gaged sitesutil_nps_getflow
Retrieve non-point source (NPS) supporting data from SWFWMD web servicesutil_nps_getswfwmd
Get flow data from USGS for NPS calculationsutil_nps_getusgsflow
Get water quality data for NPS gaged flowsutil_nps_getwq
Utility function for non-point source (NPS) ungaged workflow to create land use and soil datautil_nps_landsoil
Utility function to create non-point source (NPS) ungaged land use and soil runoff coefficientsutil_nps_landsoilrc
Summarize non-point source (NPS) ungaged loads by land useutil_nps_lusumm
Utility function for non-point source (NPS) ungaged workflow to prepare land use and soil data for logistic regressionutil_nps_preplog
Prep rain data for non-point source (NPS) ungaged load estimatesutil_nps_preprain
Create bay segment column for non-point source (NPS) load datautil_nps_segment
Create unioned base layer for non-point source (NPS) ungaged load estimation in the Tampa Bay watershedutil_nps_tbbase
Fast Spatial Intersection and Union Using GDALutil_nps_union
Helper function for union operationutil_nps_unionchunk
Helper function for union operationutil_nps_unionnochunk
Prep Verna Wellfield data for use in AD and NPS calculationsutil_prepverna
Add column names for point source data from raw entity datautil_ps_addcol
Create a data frame of formatting issues with point source input filesutil_ps_checkfls
Check units for point source from raw entity datautil_ps_checkuni
Get point source entity information from file nameutil_ps_facinfo
Fill missing point source data with annual averageutil_ps_fillmis
Light edits to the outfall ID column for point source datautil_ps_fixoutfall
Get AOC LLC discharge monitoring report data from FDEP OCULUSutil_ps_getaoc
Get MacDill AFB WWTP discharge monitoring report data from FDEP OCULUSutil_ps_getmacdill
Fill missing concentration data for miscellaneous industrial point source facilitiesutil_ps_misc
Fill missing concentration data for Mosaic industrial point source facilitiesutil_ps_mosaic
Create Pasco Reuse point source input datautil_ps_pascoreuse
Retrieve spring water quality data from APIsutil_spr_getwq
Summarize load estimatesutil_summ